Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THRAP10827 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.46■□□□□ 0.39
THRAP10827 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
THRAP10827 AC099343.3-201ENST00000605834 2503 ntBASIC17.46■□□□□ 0.39
THRAP10827 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
THRAP10827 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THRAP10827 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THRAP10827 AC106795.1-205ENST00000512851 1056 ntBASIC17.46■□□□□ 0.39
THRAP10827 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.46■□□□□ 0.39
THRAP10827 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.46■□□□□ 0.39
THRAP10827 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
THRAP10827 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.46■□□□□ 0.39
THRAP10827 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THRAP10827 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.46■□□□□ 0.39
THRAP10827 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
THRAP10827 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
THRAP10827 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
THRAP10827 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
THRAP10827 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
THRAP10827 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
THRAP10827 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
THRAP10827 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 CROCCP2-202ENST00000412962 2773 ntBASIC17.45■□□□□ 0.38
THRAP10827 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
THRAP10827 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 POM121L3P-201ENST00000419331 1163 ntBASIC17.45■□□□□ 0.38
THRAP10827 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.45■□□□□ 0.38
THRAP10827 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 BNIP3P18-201ENST00000593976 575 ntBASIC17.45■□□□□ 0.38
THRAP10827 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.45■□□□□ 0.38
THRAP10827 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 REXO1L6P-202ENST00000619970 1078 ntBASIC17.45■□□□□ 0.38
THRAP10827 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
THRAP10827 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THRAP10827 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.45■□□□□ 0.38
THRAP10827 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
THRAP10827 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 AL024508.2-201ENST00000607749 1894 ntBASIC17.44■□□□□ 0.38
THRAP10827 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.44■□□□□ 0.38
THRAP10827 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.44■□□□□ 0.38
THRAP10827 SAPCD2P3-201ENST00000455031 850 ntBASIC17.44■□□□□ 0.38
THRAP10827 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.44■□□□□ 0.38
THRAP10827 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.44■□□□□ 0.38
THRAP10827 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
THRAP10827 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
THRAP10827 SLC25A6P4-201ENST00000586535 553 ntBASIC17.44■□□□□ 0.38
THRAP10827 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.44■□□□□ 0.38
THRAP10827 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
THRAP10827 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.44■□□□□ 0.38
THRAP10827 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THRAP10827 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.43■□□□□ 0.38
THRAP10827 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THRAP10827 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.43■□□□□ 0.38
THRAP10827 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.43■□□□□ 0.38
THRAP10827 TSPY12P-201ENST00000421279 868 ntBASIC17.43■□□□□ 0.38
THRAP10827 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.43■□□□□ 0.38
THRAP10827 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.43■□□□□ 0.38
THRAP10827 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms