Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
SP9P0CG40 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SP9P0CG40 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SP9P0CG40 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SP9P0CG40 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SP9P0CG40 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SP9P0CG40 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SP9P0CG40 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.9■□□□□ 0.3
SP9P0CG40 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.9■□□□□ 0.3
SP9P0CG40 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.9■□□□□ 0.3
SP9P0CG40 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SP9P0CG40 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.9■□□□□ 0.3
SP9P0CG40 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 DGCR5-201ENST00000399539 862 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 AL512384.1-201ENST00000406683 331 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.9■□□□□ 0.3
SP9P0CG40 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.9■□□□□ 0.3
SP9P0CG40 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 RN7SL752P-201ENST00000463779 287 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.9■□□□□ 0.3
SP9P0CG40 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SP9P0CG40 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.9■□□□□ 0.3
SP9P0CG40 AC009407.1-201ENST00000568958 598 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 AC008738.7-201ENST00000609744 511 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 AC007967.4-201ENST00000614700 386 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 AC073592.3-201ENST00000625118 1834 ntBASIC16.9■□□□□ 0.3
SP9P0CG40 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SP9P0CG40 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 AP006294.1-201ENST00000415407 339 ntBASIC16.89■□□□□ 0.29
SP9P0CG40 AC092658.1-201ENST00000505836 891 ntBASIC16.89■□□□□ 0.29
SP9P0CG40 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.89■□□□□ 0.29
SP9P0CG40 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.89■□□□□ 0.29
SP9P0CG40 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.89■□□□□ 0.29
SP9P0CG40 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SP9P0CG40 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.89■□□□□ 0.29
SP9P0CG40 RARRES2P9-201ENST00000565168 469 ntBASIC16.89■□□□□ 0.29
SP9P0CG40 AC104794.3-201ENST00000566840 1248 ntBASIC16.89■□□□□ 0.29
SP9P0CG40 AC132938.2-201ENST00000579188 680 ntBASIC16.89■□□□□ 0.29
SP9P0CG40 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SP9P0CG40 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SP9P0CG40 AL591163.1-201ENST00000641757 987 ntBASIC16.89■□□□□ 0.29
SP9P0CG40 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
SP9P0CG40 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SP9P0CG40 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.89■□□□□ 0.29
SP9P0CG40 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SP9P0CG40 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SP9P0CG40 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SP9P0CG40 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SP9P0CG40 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 AL031598.1-201ENST00000561511 1773 ntBASIC16.88■□□□□ 0.29
SP9P0CG40 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.88■□□□□ 0.29
SP9P0CG40 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 AC112492.5-201ENST00000421897 457 ntBASIC16.88■□□□□ 0.29
SP9P0CG40 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.88■□□□□ 0.29
SP9P0CG40 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.88■□□□□ 0.29
SP9P0CG40 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.88■□□□□ 0.29
SP9P0CG40 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.88■□□□□ 0.29
SP9P0CG40 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SP9P0CG40 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SP9P0CG40 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SP9P0CG40 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms