Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.28■□□□□ 0.2
RRP8O43159 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RRP8O43159 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRP8O43159 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 AL049812.1-201ENST00000432563 2267 ntBASIC16.28■□□□□ 0.2
RRP8O43159 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RRP8O43159 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 LINC00982-205ENST00000420957 435 ntBASIC16.27■□□□□ 0.2
RRP8O43159 HLA-V-201ENST00000429037 534 ntBASIC16.27■□□□□ 0.2
RRP8O43159 AC125807.1-201ENST00000483097 614 ntBASIC16.27■□□□□ 0.2
RRP8O43159 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.27■□□□□ 0.2
RRP8O43159 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
RRP8O43159 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 AL512356.2-201ENST00000546955 174 ntBASIC16.27■□□□□ 0.2
RRP8O43159 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.27■□□□□ 0.2
RRP8O43159 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.27■□□□□ 0.2
RRP8O43159 MIR6752-201ENST00000618442 71 ntBASIC16.27■□□□□ 0.2
RRP8O43159 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
RRP8O43159 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.27■□□□□ 0.2
RRP8O43159 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRP8O43159 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.27■□□□□ 0.19
RRP8O43159 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RRP8O43159 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.27■□□□□ 0.19
RRP8O43159 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.27■□□□□ 0.19
RRP8O43159 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRP8O43159 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RRP8O43159 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 AL031598.1-201ENST00000561511 1773 ntBASIC16.26■□□□□ 0.19
RRP8O43159 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.26■□□□□ 0.19
RRP8O43159 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 FAM185BP-201ENST00000443595 716 ntBASIC16.26■□□□□ 0.19
RRP8O43159 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.26■□□□□ 0.19
RRP8O43159 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 CR383656.12-201ENST00000549567 513 ntBASIC16.26■□□□□ 0.19
RRP8O43159 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 AC109462.3-201ENST00000573934 613 ntBASIC16.26■□□□□ 0.19
RRP8O43159 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RRP8O43159 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RRP8O43159 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 AC092919.2-201ENST00000623631 1645 ntBASIC16.26■□□□□ 0.19
RRP8O43159 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.26■□□□□ 0.19
RRP8O43159 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRP8O43159 LETM1P2-201ENST00000597330 2178 ntBASIC16.26■□□□□ 0.19
RRP8O43159 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RRP8O43159 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.25■□□□□ 0.19
RRP8O43159 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RRP8O43159 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.25■□□□□ 0.19
RRP8O43159 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RRP8O43159 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.25■□□□□ 0.19
RRP8O43159 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.25■□□□□ 0.19
RRP8O43159 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms