Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AL353593.2-201ENST00000602529 1483 ntBASIC17.65■□□□□ 0.42
CAPN8A6NHC0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 ABCD1P5-201ENST00000445663 754 ntBASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AC132008.2-207ENST00000454517 770 ntBASIC17.65■□□□□ 0.42
CAPN8A6NHC0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AC109462.3-201ENST00000573934 613 ntBASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 REXO1L6P-202ENST00000619970 1078 ntBASIC17.65■□□□□ 0.42
CAPN8A6NHC0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN8A6NHC0 HLA-J-201ENST00000462773 1622 ntBASIC17.65■□□□□ 0.42
CAPN8A6NHC0 AC133963.1-201ENST00000504166 1679 ntBASIC17.64■□□□□ 0.42
CAPN8A6NHC0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN8A6NHC0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN8A6NHC0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.42
CAPN8A6NHC0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 AKR1C7P-201ENST00000305623 895 ntBASIC17.64■□□□□ 0.41
CAPN8A6NHC0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 AP001269.4-201ENST00000609611 512 ntBASIC17.64■□□□□ 0.41
CAPN8A6NHC0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CAPN8A6NHC0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
CAPN8A6NHC0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 IGHV3-52-201ENST00000519770 353 ntBASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AP002469.2-201ENST00000531724 424 ntBASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AC120114.3-201ENST00000611923 658 ntBASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AP000867.4-201ENST00000641616 219 ntBASIC17.63■□□□□ 0.41
CAPN8A6NHC0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AC022211.2-201ENST00000585075 2527 ntBASIC17.63■□□□□ 0.41
CAPN8A6NHC0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN8A6NHC0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN8A6NHC0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN8A6NHC0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms