Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 KRT18P65-201ENST00000439811 1286 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AP002469.2-201ENST00000531724 424 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC009533.2-201ENST00000543664 586 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC104692.2-201ENST00000603054 253 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC064862.7-201ENST00000604520 867 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 REXO1L6P-202ENST00000619970 1078 ntBASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TP73-AS1-210ENST00000637775 1455 ntBASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC099398.1-201ENST00000567919 2776 ntBASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AKR1C7P-201ENST00000305623 895 ntBASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RCN1P2-201ENST00000398357 915 ntBASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC132008.2-207ENST00000454517 770 ntBASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LINC01451-201ENST00000623792 534 ntBASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms