Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 AC012640.2-201ENST00000561606 901 ntBASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 AC034105.1-201ENST00000563488 319 ntBASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 GMCL1P1-201ENST00000463439 1581 ntBASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 LAGE3P1-201ENST00000425356 484 ntBASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 AC092910.1-201ENST00000482027 1129 ntBASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 AC105339.3-201ENST00000560043 636 ntBASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 MTDHP4-201ENST00000600287 670 ntBASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA3Q9Y5H0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 MED15P5-201ENST00000423150 992 ntBASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 AC007967.3-201ENST00000434308 558 ntBASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 RNA5SP415-201ENST00000517246 115 ntBASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 AC140113.2-201ENST00000604370 208 ntBASIC16.92■□□□□ 0.3
PCDHGA3Q9Y5H0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms