Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC021087.4-201ENST00000563761 564 ntBASIC18.52■□□□□ 0.56
CISHQ9NSE2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 MTDHP4-201ENST00000600287 670 ntBASIC18.52■□□□□ 0.56
CISHQ9NSE2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 TP73-AS1-207ENST00000624167 988 ntBASIC18.52■□□□□ 0.56
CISHQ9NSE2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CISHQ9NSE2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CISHQ9NSE2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.52■□□□□ 0.55
CISHQ9NSE2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.52■□□□□ 0.55
CISHQ9NSE2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CISHQ9NSE2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CISHQ9NSE2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CISHQ9NSE2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CISHQ9NSE2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CISHQ9NSE2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CISHQ9NSE2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CISHQ9NSE2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 AC025062.2-201ENST00000605477 670 ntBASIC18.51■□□□□ 0.55
CISHQ9NSE2 AL031008.1-201ENST00000619963 541 ntBASIC18.51■□□□□ 0.55
CISHQ9NSE2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CISHQ9NSE2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CISHQ9NSE2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 ACTG1P4-201ENST00000425123 1122 ntBASIC18.5■□□□□ 0.55
CISHQ9NSE2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 AC064862.7-201ENST00000604520 867 ntBASIC18.5■□□□□ 0.55
CISHQ9NSE2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CISHQ9NSE2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CISHQ9NSE2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CISHQ9NSE2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CISHQ9NSE2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CISHQ9NSE2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CISHQ9NSE2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.49■□□□□ 0.55
CISHQ9NSE2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CISHQ9NSE2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms