Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 KRT17P7-201ENST00000451704 1104 ntBASIC24.37■■□□□ 1.49
UBR1Q8IWV7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 AC008738.7-201ENST00000609744 511 ntBASIC24.37■■□□□ 1.49
UBR1Q8IWV7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
UBR1Q8IWV7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 GPR53P-205ENST00000457298 1084 ntBASIC24.36■■□□□ 1.49
UBR1Q8IWV7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
UBR1Q8IWV7 WIZP1-201ENST00000531444 2299 ntBASIC24.36■■□□□ 1.49
UBR1Q8IWV7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 AC105233.2-201ENST00000523697 349 ntBASIC24.35■■□□□ 1.49
UBR1Q8IWV7 AF228730.5-201ENST00000530288 346 ntBASIC24.35■■□□□ 1.49
UBR1Q8IWV7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 API5-211ENST00000534695 560 ntTSL 5 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC24.35■■□□□ 1.49
UBR1Q8IWV7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.35■■□□□ 1.49
UBR1Q8IWV7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 GIMAP3P-201ENST00000495150 836 ntBASIC24.34■■□□□ 1.49
UBR1Q8IWV7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 BANF1P1-201ENST00000553684 263 ntBASIC24.34■■□□□ 1.49
UBR1Q8IWV7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 RARRES2P9-201ENST00000565168 469 ntBASIC24.34■■□□□ 1.49
UBR1Q8IWV7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 TEX28P1-201ENST00000613479 1221 ntBASIC24.34■■□□□ 1.49
UBR1Q8IWV7 TEX28P2-201ENST00000617764 1221 ntBASIC24.34■■□□□ 1.49
UBR1Q8IWV7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC24.34■■□□□ 1.49
UBR1Q8IWV7 FLJ13224-201ENST00000313737 1514 ntBASIC24.34■■□□□ 1.49
UBR1Q8IWV7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 MIR1909-201ENST00000411312 80 ntBASIC24.33■■□□□ 1.49
UBR1Q8IWV7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
UBR1Q8IWV7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
UBR1Q8IWV7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.33■■□□□ 1.48
UBR1Q8IWV7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
UBR1Q8IWV7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
UBR1Q8IWV7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC24.32■■□□□ 1.48
UBR1Q8IWV7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms