Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 AC132938.5-201ENST00000624980 1813 ntBASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 SPDYE21P-201ENST00000413323 827 ntBASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 IGHV3-65-201ENST00000523210 341 ntBASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 AC096734.2-201ENST00000562054 433 ntBASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RP1L1Q8IWN7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 AC063926.2-201ENST00000623766 1308 ntBASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 AC100803.2-201ENST00000562459 1963 ntBASIC15.71■□□□□ 0.11
RP1L1Q8IWN7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RP1L1Q8IWN7 AP002414.1-201ENST00000391405 1147 ntBASIC15.71■□□□□ 0.1
RP1L1Q8IWN7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.71■□□□□ 0.1
RP1L1Q8IWN7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.71■□□□□ 0.1
RP1L1Q8IWN7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.71■□□□□ 0.1
RP1L1Q8IWN7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.71■□□□□ 0.1
RP1L1Q8IWN7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AL096828.2-201ENST00000567259 1965 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AC009949.1-201ENST00000623048 1830 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 RNA5SP421-201ENST00000516864 134 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AC069262.1-201ENST00000539058 672 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AC051619.7-201ENST00000568314 623 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AC023141.13-201ENST00000604991 943 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 AL020989.1-201ENST00000422979 469 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 ADH5P3-201ENST00000433842 1137 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 TSPY16P-201ENST00000449843 468 ntBASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.7■□□□□ 0.1
RP1L1Q8IWN7 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms