Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZFHX4Q86UP3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 AC100757.3-201ENST00000622361 1406 ntBASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 AL021578.1-201ENST00000613646 709 ntBASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 RBPMS2P1-201ENST00000437762 623 ntBASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 SLC25A24-204ENST00000569674 2357 ntBASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 AC006538.1-201ENST00000567905 1585 ntBASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZFHX4Q86UP3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AL592309.1-201ENST00000443127 649 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC009477.1-201ENST00000452936 217 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 CXCL1P1-201ENST00000502804 216 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC079140.1-201ENST00000508039 487 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC007064.4-201ENST00000637740 555 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 FAM185BP-201ENST00000443595 716 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.11■□□□□ 0.17
ZFHX4Q86UP3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 AC135776.1-201ENST00000319817 2481 ntBASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 RN7SL589P-201ENST00000481268 310 ntBASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.1■□□□□ 0.17
ZFHX4Q86UP3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms