Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 CRYGEP-201ENST00000412192 528 ntBASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 KRT18P2-201ENST00000447938 1258 ntBASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 RNA5SP416-201ENST00000516838 111 ntBASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 MIR4751-201ENST00000578027 74 ntBASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 AC064836.3-201ENST00000607928 673 ntBASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 AL133373.2-201ENST00000623187 2828 ntBASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 PI4KAP1-204ENST00000612579 1703 ntBASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SWSAP1Q6NVH7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 VN2R19P-201ENST00000442399 1052 ntBASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 AC092865.5-201ENST00000545435 363 ntBASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.3■□□□□ 0.68
SWSAP1Q6NVH7 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 AC067852.2-201ENST00000590513 2313 ntBASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 GNAS-203ENST00000306120 1878 ntBASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 AC068880.1-201ENST00000507289 2297 ntBASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 PRSS29P-201ENST00000440800 595 ntBASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 GGTLC5P-201ENST00000617623 998 ntBASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms