Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
KRT6CP48668 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 AC022211.2-201ENST00000585075 2527 ntBASIC16.88■□□□□ 0.29
KRT6CP48668 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 AC103564.2-201ENST00000432853 1299 ntBASIC16.88■□□□□ 0.29
KRT6CP48668 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT6CP48668 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 AC111152.3-201ENST00000569699 673 ntBASIC16.88■□□□□ 0.29
KRT6CP48668 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT6CP48668 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT6CP48668 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT6CP48668 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KRT6CP48668 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT6CP48668 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
KRT6CP48668 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT6CP48668 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
KRT6CP48668 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT6CP48668 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
KRT6CP48668 FAM220CP-201ENST00000395253 831 ntBASIC16.87■□□□□ 0.29
KRT6CP48668 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 AL138831.2-201ENST00000606564 490 ntBASIC16.87■□□□□ 0.29
KRT6CP48668 AC019129.2-201ENST00000609837 1235 ntBASIC16.87■□□□□ 0.29
KRT6CP48668 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT6CP48668 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6CP48668 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6CP48668 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT6CP48668 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6CP48668 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6CP48668 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6CP48668 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.86■□□□□ 0.29
KRT6CP48668 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6CP48668 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT6CP48668 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KRT6CP48668 AC246785.2-201ENST00000432512 513 ntBASIC16.86■□□□□ 0.29
KRT6CP48668 VENTXP7-201ENST00000475503 772 ntBASIC16.86■□□□□ 0.29
KRT6CP48668 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms