Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.59■□□□□ 0.73
TM4SF4P48230 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.59■□□□□ 0.73
TM4SF4P48230 MIR3909-201ENST00000579518 119 ntBASIC19.59■□□□□ 0.73
TM4SF4P48230 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.59■□□□□ 0.73
TM4SF4P48230 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TM4SF4P48230 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 AC008738.7-201ENST00000609744 511 ntBASIC19.59■□□□□ 0.73
TM4SF4P48230 AC003101.2-201ENST00000612557 442 ntBASIC19.59■□□□□ 0.73
TM4SF4P48230 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TM4SF4P48230 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 AL353732.1-201ENST00000569618 1459 ntBASIC19.59■□□□□ 0.73
TM4SF4P48230 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
TM4SF4P48230 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TM4SF4P48230 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TM4SF4P48230 AL020996.1-203ENST00000536896 2307 ntBASIC19.58■□□□□ 0.73
TM4SF4P48230 AP3S2-216ENST00000617003 1561 ntBASIC19.58■□□□□ 0.73
TM4SF4P48230 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF4P48230 AC087499.5-201ENST00000452760 1342 ntBASIC19.58■□□□□ 0.73
TM4SF4P48230 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
TM4SF4P48230 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF4P48230 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.58■□□□□ 0.73
TM4SF4P48230 RNU1-129P-201ENST00000384064 167 ntBASIC19.58■□□□□ 0.72
TM4SF4P48230 DGCR5-201ENST00000399539 862 ntBASIC19.58■□□□□ 0.72
TM4SF4P48230 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.58■□□□□ 0.72
TM4SF4P48230 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TM4SF4P48230 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.58■□□□□ 0.72
TM4SF4P48230 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.58■□□□□ 0.72
TM4SF4P48230 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF4P48230 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF4P48230 U1.21-201ENST00000580816 167 ntBASIC19.58■□□□□ 0.72
TM4SF4P48230 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
TM4SF4P48230 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 MIR6805-201ENST00000615055 62 ntBASIC19.58■□□□□ 0.72
TM4SF4P48230 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.58■□□□□ 0.72
TM4SF4P48230 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.58■□□□□ 0.72
TM4SF4P48230 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF4P48230 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF4P48230 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TM4SF4P48230 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TM4SF4P48230 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 HCG4-201ENST00000418983 998 ntBASIC19.57■□□□□ 0.72
TM4SF4P48230 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.57■□□□□ 0.72
TM4SF4P48230 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TM4SF4P48230 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.57■□□□□ 0.72
TM4SF4P48230 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 AC084346.2-201ENST00000607097 949 ntBASIC19.57■□□□□ 0.72
TM4SF4P48230 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TM4SF4P48230 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.57■□□□□ 0.72
TM4SF4P48230 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF4P48230 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF4P48230 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF4P48230 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF4P48230 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.56■□□□□ 0.72
TM4SF4P48230 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF4P48230 AL512384.1-201ENST00000406683 331 ntBASIC19.56■□□□□ 0.72
TM4SF4P48230 AC142381.1-201ENST00000426099 345 ntBASIC19.56■□□□□ 0.72
TM4SF4P48230 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms