Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SFTPBP07988 AC008894.3-201ENST00000624324 3103 ntBASIC15.16■□□□□ 0.02
SFTPBP07988 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 AL645929.1-201ENST00000420084 975 ntBASIC15.16■□□□□ 0.02
SFTPBP07988 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.16■□□□□ 0.02
SFTPBP07988 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.16■□□□□ 0.02
SFTPBP07988 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.16■□□□□ 0.02
SFTPBP07988 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.16■□□□□ 0.02
SFTPBP07988 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.16■□□□□ 0.02
SFTPBP07988 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.16■□□□□ 0.02
SFTPBP07988 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 AL023806.1-201ENST00000603994 1649 ntBASIC15.16■□□□□ 0.02
SFTPBP07988 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.16■□□□□ 0.02
SFTPBP07988 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.16■□□□□ 0.02
SFTPBP07988 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SFTPBP07988 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.16■□□□□ 0.02
SFTPBP07988 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SFTPBP07988 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SFTPBP07988 REXO1L11P-201ENST00000620964 1927 ntBASIC15.15■□□□□ 0.02
SFTPBP07988 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
SFTPBP07988 KRT8P47-201ENST00000604727 1398 ntBASIC15.15■□□□□ 0.02
SFTPBP07988 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.15■□□□□ 0.02
SFTPBP07988 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.15■□□□□ 0.02
SFTPBP07988 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.15■□□□□ 0.02
SFTPBP07988 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.15■□□□□ 0.02
SFTPBP07988 AC116407.2-201ENST00000613639 860 ntBASIC15.15■□□□□ 0.02
SFTPBP07988 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.15■□□□□ 0.02
SFTPBP07988 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
SFTPBP07988 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SFTPBP07988 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SFTPBP07988 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SFTPBP07988 AL138688.1-201ENST00000624851 1594 ntBASIC15.15■□□□□ 0.02
SFTPBP07988 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SFTPBP07988 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.14■□□□□ 0.01
SFTPBP07988 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
SFTPBP07988 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.14■□□□□ 0.01
SFTPBP07988 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SFTPBP07988 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.14■□□□□ 0.01
SFTPBP07988 HLA-F-220ENST00000434407 884 ntBASIC15.14■□□□□ 0.01
SFTPBP07988 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.14■□□□□ 0.01
SFTPBP07988 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.14■□□□□ 0.01
SFTPBP07988 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms