Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.53■□□□□ 0.72
TPM3P06753 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TPM3P06753 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 AC008741.2-201ENST00000612792 3115 ntBASIC19.53■□□□□ 0.72
TPM3P06753 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM3P06753 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM3P06753 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.53■□□□□ 0.72
TPM3P06753 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.53■□□□□ 0.72
TPM3P06753 KRT18P65-201ENST00000439811 1286 ntBASIC19.53■□□□□ 0.72
TPM3P06753 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.53■□□□□ 0.72
TPM3P06753 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.53■□□□□ 0.72
TPM3P06753 AC142381.4-202ENST00000563973 229 ntBASIC19.53■□□□□ 0.72
TPM3P06753 AL512604.3-201ENST00000569583 964 ntBASIC19.53■□□□□ 0.72
TPM3P06753 MIR3917-201ENST00000580971 93 ntBASIC19.53■□□□□ 0.72
TPM3P06753 AC024243.1-201ENST00000609234 778 ntBASIC19.53■□□□□ 0.72
TPM3P06753 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TPM3P06753 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TPM3P06753 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TPM3P06753 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.53■□□□□ 0.72
TPM3P06753 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TPM3P06753 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TPM3P06753 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TPM3P06753 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TPM3P06753 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TPM3P06753 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
TPM3P06753 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.52■□□□□ 0.72
TPM3P06753 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.52■□□□□ 0.72
TPM3P06753 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.52■□□□□ 0.72
TPM3P06753 PVRIG2P-201ENST00000435460 978 ntBASIC19.52■□□□□ 0.72
TPM3P06753 RBM17P1-201ENST00000453646 1190 ntBASIC19.52■□□□□ 0.72
TPM3P06753 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.52■□□□□ 0.72
TPM3P06753 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.52■□□□□ 0.72
TPM3P06753 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.52■□□□□ 0.72
TPM3P06753 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TPM3P06753 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.52■□□□□ 0.71
TPM3P06753 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.52■□□□□ 0.71
TPM3P06753 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TPM3P06753 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.52■□□□□ 0.71
TPM3P06753 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.52■□□□□ 0.71
TPM3P06753 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM3P06753 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TPM3P06753 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM3P06753 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM3P06753 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.51■□□□□ 0.71
TPM3P06753 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM3P06753 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.51■□□□□ 0.71
TPM3P06753 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.51■□□□□ 0.71
TPM3P06753 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.51■□□□□ 0.71
TPM3P06753 FITM1-202ENST00000559294 800 ntBASIC19.51■□□□□ 0.71
TPM3P06753 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.51■□□□□ 0.71
TPM3P06753 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.51■□□□□ 0.71
TPM3P06753 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TPM3P06753 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms