Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 AC019129.2-201ENST00000609837 1235 ntBASIC16.42■□□□□ 0.22
CLIC1O00299 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.42■□□□□ 0.22
CLIC1O00299 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.42■□□□□ 0.22
CLIC1O00299 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CLIC1O00299 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLIC1O00299 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CLIC1O00299 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.42■□□□□ 0.22
CLIC1O00299 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLIC1O00299 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CLIC1O00299 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 AC007967.3-201ENST00000434308 558 ntBASIC16.41■□□□□ 0.22
CLIC1O00299 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.41■□□□□ 0.22
CLIC1O00299 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIC1O00299 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIC1O00299 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIC1O00299 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLIC1O00299 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.41■□□□□ 0.22
CLIC1O00299 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.41■□□□□ 0.22
CLIC1O00299 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIC1O00299 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLIC1O00299 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLIC1O00299 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIC1O00299 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLIC1O00299 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.4■□□□□ 0.22
CLIC1O00299 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.4■□□□□ 0.22
CLIC1O00299 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 AK4P3-201ENST00000418260 669 ntBASIC16.4■□□□□ 0.22
CLIC1O00299 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIC1O00299 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.4■□□□□ 0.22
CLIC1O00299 AC073912.3-201ENST00000624414 853 ntBASIC16.4■□□□□ 0.22
CLIC1O00299 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIC1O00299 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLIC1O00299 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.4■□□□□ 0.22
CLIC1O00299 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CLIC1O00299 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLIC1O00299 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CLIC1O00299 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLIC1O00299 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLIC1O00299 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.39■□□□□ 0.21
CLIC1O00299 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLIC1O00299 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.39■□□□□ 0.21
CLIC1O00299 GUSBP12-201ENST00000513727 720 ntBASIC16.39■□□□□ 0.21
CLIC1O00299 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.39■□□□□ 0.21
CLIC1O00299 PCDHB19P-201ENST00000570871 2371 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms