Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREX1Q9NSU2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREX1Q9NSU2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREX1Q9NSU2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREX1Q9NSU2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TREX1Q9NSU2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TREX1Q9NSU2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 ABCD1P5-201ENST00000445663 754 ntBASIC17.34■□□□□ 0.37
TREX1Q9NSU2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 AC093458.2-201ENST00000623150 629 ntBASIC17.34■□□□□ 0.37
TREX1Q9NSU2 AC011676.5-201ENST00000624864 2660 ntBASIC17.34■□□□□ 0.37
TREX1Q9NSU2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TREX1Q9NSU2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TREX1Q9NSU2 SIGLEC16-201ENST00000599858 1437 ntBASIC17.33■□□□□ 0.36
TREX1Q9NSU2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 NUS1P2-201ENST00000417358 873 ntBASIC17.33■□□□□ 0.36
TREX1Q9NSU2 AL020989.1-201ENST00000422979 469 ntBASIC17.33■□□□□ 0.36
TREX1Q9NSU2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 AC073592.4-201ENST00000623827 446 ntBASIC17.33■□□□□ 0.36
TREX1Q9NSU2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 HTR7P1-202ENST00000624664 4411 ntBASIC17.33■□□□□ 0.36
TREX1Q9NSU2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TREX1Q9NSU2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TREX1Q9NSU2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms