Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C12orf4Q9NQ89 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 PRORSD1P-201ENST00000295112 541 ntBASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf4Q9NQ89 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C12orf4Q9NQ89 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C12orf4Q9NQ89 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C12orf4Q9NQ89 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AC104581.4-201ENST00000623126 3052 ntBASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AL158047.1-201ENST00000445918 881 ntBASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
C12orf4Q9NQ89 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 AC092338.2-201ENST00000568827 1415 ntBASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 UNC93B2-201ENST00000285383 730 ntBASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 TSPY20P-201ENST00000450910 630 ntBASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 AP003071.4-201ENST00000562276 1284 ntBASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
C12orf4Q9NQ89 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms