Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RPS8P6-201ENST00000426177 609 ntBASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 PGM5P2-202ENST00000637225 1043 ntBASIC18.89■□□□□ 0.61
VPS52Q8N1B4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 SIGLEC16-201ENST00000599858 1437 ntBASIC18.89■□□□□ 0.61
VPS52Q8N1B4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS52Q8N1B4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AC073621.1-201ENST00000392730 636 ntBASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AC023274.1-201ENST00000418278 595 ntBASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AC004832.2-201ENST00000426397 482 ntBASIC18.88■□□□□ 0.61
VPS52Q8N1B4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AC073592.5-201ENST00000624854 528 ntBASIC18.88■□□□□ 0.61
VPS52Q8N1B4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 AC022898.2-201ENST00000616822 1312 ntBASIC18.88■□□□□ 0.61
VPS52Q8N1B4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS52Q8N1B4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 COX5BP2-201ENST00000392354 334 ntBASIC18.87■□□□□ 0.61
VPS52Q8N1B4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 AC136632.2-201ENST00000512891 861 ntBASIC18.87■□□□□ 0.61
VPS52Q8N1B4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 AC002347.1-201ENST00000569543 541 ntBASIC18.87■□□□□ 0.61
VPS52Q8N1B4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VPS52Q8N1B4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.86■□□□□ 0.61
VPS52Q8N1B4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS52Q8N1B4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms