Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 MIR940-201ENST00000401276 94 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AC122714.2-201ENST00000502787 707 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AC106730.1-201ENST00000566722 1090 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AP001269.4-201ENST00000609611 512 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AL355877.3-201ENST00000622820 899 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 AC011676.5-201ENST00000624864 2660 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.28■□□□□ 0.52
RNF43Q68DV7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF43Q68DV7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF43Q68DV7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 AC010460.3-201ENST00000511359 1579 ntBASIC18.27■□□□□ 0.52
RNF43Q68DV7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 KRT18P67-201ENST00000432816 1264 ntBASIC18.27■□□□□ 0.52
RNF43Q68DV7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF43Q68DV7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF43Q68DV7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
RNF43Q68DV7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF43Q68DV7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.27■□□□□ 0.51
RNF43Q68DV7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.27■□□□□ 0.51
RNF43Q68DV7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF43Q68DV7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 ABCD1P5-201ENST00000445663 754 ntBASIC18.26■□□□□ 0.51
RNF43Q68DV7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 FGFR3P6-201ENST00000457012 610 ntBASIC18.26■□□□□ 0.51
RNF43Q68DV7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AL023806.1-201ENST00000603994 1649 ntBASIC18.26■□□□□ 0.51
RNF43Q68DV7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RNF43Q68DV7 AL118508.1-201ENST00000613502 2345 ntBASIC18.26■□□□□ 0.51
RNF43Q68DV7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF43Q68DV7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF43Q68DV7 AC006116.8-202ENST00000587620 1550 ntBASIC18.25■□□□□ 0.51
RNF43Q68DV7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF43Q68DV7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms