Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.43■□□□□ 0.7
LBX1P52954 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LBX1P52954 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LBX1P52954 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LBX1P52954 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LBX1P52954 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LBX1P52954 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LBX1P52954 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LBX1P52954 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
LBX1P52954 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
LBX1P52954 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LBX1P52954 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LBX1P52954 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.42■□□□□ 0.7
LBX1P52954 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.42■□□□□ 0.7
LBX1P52954 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LBX1P52954 AC012569.1-201ENST00000591191 1524 ntBASIC19.42■□□□□ 0.7
LBX1P52954 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.42■□□□□ 0.7
LBX1P52954 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.42■□□□□ 0.7
LBX1P52954 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LBX1P52954 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
LBX1P52954 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LBX1P52954 AC106872.11-201ENST00000605838 421 ntBASIC19.42■□□□□ 0.7
LBX1P52954 AL589739.1-201ENST00000607720 493 ntBASIC19.42■□□□□ 0.7
LBX1P52954 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LBX1P52954 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.42■□□□□ 0.7
LBX1P52954 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LBX1P52954 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LBX1P52954 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LBX1P52954 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.41■□□□□ 0.7
LBX1P52954 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 MTND6P24-201ENST00000440466 518 ntBASIC19.41■□□□□ 0.7
LBX1P52954 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.41■□□□□ 0.7
LBX1P52954 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LBX1P52954 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
LBX1P52954 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.41■□□□□ 0.7
LBX1P52954 AL035456.1-201ENST00000456064 1369 ntBASIC19.41■□□□□ 0.7
LBX1P52954 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.41■□□□□ 0.7
LBX1P52954 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LBX1P52954 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
LBX1P52954 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LBX1P52954 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.4■□□□□ 0.7
LBX1P52954 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.4■□□□□ 0.7
LBX1P52954 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.4■□□□□ 0.7
LBX1P52954 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
LBX1P52954 MIR1247-201ENST00000408206 136 ntBASIC19.4■□□□□ 0.7
LBX1P52954 GPAA1P2-201ENST00000417923 928 ntBASIC19.4■□□□□ 0.7
LBX1P52954 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.4■□□□□ 0.7
LBX1P52954 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 ELK1P1-201ENST00000485699 580 ntBASIC19.4■□□□□ 0.7
LBX1P52954 DUTP2-201ENST00000519164 463 ntBASIC19.4■□□□□ 0.7
LBX1P52954 AC243960.2-201ENST00000600996 747 ntBASIC19.4■□□□□ 0.7
LBX1P52954 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LBX1P52954 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LBX1P52954 ESPNP-201ENST00000270691 2015 ntBASIC19.4■□□□□ 0.7
LBX1P52954 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
LBX1P52954 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.4■□□□□ 0.7
LBX1P52954 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LBX1P52954 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
LBX1P52954 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
LBX1P52954 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LBX1P52954 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LBX1P52954 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.39■□□□□ 0.69
LBX1P52954 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LBX1P52954 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
LBX1P52954 AC005229.1-201ENST00000392885 409 ntBASIC19.39■□□□□ 0.69
LBX1P52954 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LBX1P52954 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.39■□□□□ 0.69
LBX1P52954 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.39■□□□□ 0.69
LBX1P52954 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.39■□□□□ 0.69
LBX1P52954 MPRIPP1-201ENST00000452433 1089 ntBASIC19.39■□□□□ 0.69
LBX1P52954 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.39■□□□□ 0.69
LBX1P52954 AC055876.2-201ENST00000531834 546 ntBASIC19.39■□□□□ 0.69
LBX1P52954 AC079328.1-201ENST00000560358 952 ntBASIC19.39■□□□□ 0.69
LBX1P52954 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.39■□□□□ 0.69
LBX1P52954 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.39■□□□□ 0.69
LBX1P52954 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LBX1P52954 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LBX1P52954 AC093525.8-201ENST00000624099 1342 ntBASIC19.39■□□□□ 0.69
LBX1P52954 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms