Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 FOSL1P1-201ENST00000511041 816 ntBASIC17.56■□□□□ 0.4
VCLP18206 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 KRT126P-201ENST00000549467 1181 ntBASIC17.56■□□□□ 0.4
VCLP18206 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.56■□□□□ 0.4
VCLP18206 AP005901.3-202ENST00000581653 237 ntBASIC17.56■□□□□ 0.4
VCLP18206 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
VCLP18206 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.56■□□□□ 0.4
VCLP18206 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.56■□□□□ 0.4
VCLP18206 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VCLP18206 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
VCLP18206 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VCLP18206 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
VCLP18206 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VCLP18206 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 AL450487.1-201ENST00000426799 995 ntBASIC17.55■□□□□ 0.4
VCLP18206 DUSP5P1-201ENST00000441325 1139 ntBASIC17.55■□□□□ 0.4
VCLP18206 AC096582.2-201ENST00000510860 516 ntBASIC17.55■□□□□ 0.4
VCLP18206 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.55■□□□□ 0.4
VCLP18206 AC091304.2-201ENST00000564639 760 ntBASIC17.55■□□□□ 0.4
VCLP18206 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.55■□□□□ 0.4
VCLP18206 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VCLP18206 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VCLP18206 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
VCLP18206 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VCLP18206 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.54■□□□□ 0.4
VCLP18206 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VCLP18206 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.54■□□□□ 0.4
VCLP18206 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.54■□□□□ 0.4
VCLP18206 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VCLP18206 KRT16P4-201ENST00000453883 522 ntBASIC17.54■□□□□ 0.4
VCLP18206 AC091607.1-201ENST00000490318 1060 ntBASIC17.54■□□□□ 0.4
VCLP18206 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.54■□□□□ 0.4
VCLP18206 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.54■□□□□ 0.4
VCLP18206 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.54■□□□□ 0.4
VCLP18206 AC111152.3-201ENST00000569699 673 ntBASIC17.54■□□□□ 0.4
VCLP18206 AC012313.10-201ENST00000623509 926 ntBASIC17.54■□□□□ 0.4
VCLP18206 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
VCLP18206 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VCLP18206 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 AC125634.1-201ENST00000438758 1403 ntBASIC17.54■□□□□ 0.4
VCLP18206 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VCLP18206 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.53■□□□□ 0.4
VCLP18206 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.53■□□□□ 0.4
VCLP18206 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VCLP18206 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms