Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CFTRP13569 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC29.41■■■□□ 2.3
CFTRP13569 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CFTRP13569 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CFTRP13569 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CFTRP13569 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC29.4■■■□□ 2.3
CFTRP13569 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CFTRP13569 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CFTRP13569 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC29.4■■■□□ 2.3
CFTRP13569 AC073130.3-201ENST00000624389 2278 ntBASIC29.4■■■□□ 2.3
CFTRP13569 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC29.4■■■□□ 2.3
CFTRP13569 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC29.4■■■□□ 2.3
CFTRP13569 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC29.4■■■□□ 2.3
CFTRP13569 AC027369.6-201ENST00000525520 931 ntBASIC29.4■■■□□ 2.3
CFTRP13569 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
CFTRP13569 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC29.4■■■□□ 2.3
CFTRP13569 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC29.4■■■□□ 2.3
CFTRP13569 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CFTRP13569 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC29.4■■■□□ 2.3
CFTRP13569 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CFTRP13569 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
CFTRP13569 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CFTRP13569 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CFTRP13569 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC29.39■■■□□ 2.3
CFTRP13569 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC29.39■■■□□ 2.3
CFTRP13569 HLA-V-204ENST00000476601 1289 ntBASIC29.39■■■□□ 2.3
CFTRP13569 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
CFTRP13569 REEP4-207ENST00000523293 913 ntTSL 3 BASIC29.39■■■□□ 2.3
CFTRP13569 AL844908.2-201ENST00000609461 460 ntBASIC29.39■■■□□ 2.3
CFTRP13569 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CFTRP13569 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CFTRP13569 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC29.39■■■□□ 2.3
CFTRP13569 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CFTRP13569 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC29.39■■■□□ 2.29
CFTRP13569 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
CFTRP13569 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
CFTRP13569 AC079776.1-201ENST00000401540 1152 ntBASIC29.38■■■□□ 2.29
CFTRP13569 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC29.38■■■□□ 2.29
CFTRP13569 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC29.38■■■□□ 2.29
CFTRP13569 RARRES2P9-201ENST00000565168 469 ntBASIC29.38■■■□□ 2.29
CFTRP13569 TP53TG3HP-202ENST00000569755 579 ntBASIC29.38■■■□□ 2.29
CFTRP13569 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 REXO1L9P-201ENST00000604264 2108 ntBASIC29.38■■■□□ 2.29
CFTRP13569 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC29.38■■■□□ 2.29
CFTRP13569 IGHV3-72-202ENST00000621503 303 ntBASIC29.38■■■□□ 2.29
CFTRP13569 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC29.38■■■□□ 2.29
CFTRP13569 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
CFTRP13569 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC29.38■■■□□ 2.29
CFTRP13569 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CFTRP13569 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC29.37■■■□□ 2.29
CFTRP13569 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
CFTRP13569 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
CFTRP13569 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
CFTRP13569 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC29.37■■■□□ 2.29
CFTRP13569 IGHV3-71-201ENST00000523324 359 ntBASIC29.37■■■□□ 2.29
CFTRP13569 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC29.37■■■□□ 2.29
CFTRP13569 API5-211ENST00000534695 560 ntTSL 5 BASIC29.37■■■□□ 2.29
CFTRP13569 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CFTRP13569 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC29.37■■■□□ 2.29
CFTRP13569 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC29.37■■■□□ 2.29
CFTRP13569 GPER1-207ENST00000619052 571 ntTSL 2 BASIC29.37■■■□□ 2.29
CFTRP13569 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC29.37■■■□□ 2.29
CFTRP13569 FOXO1B-201ENST00000504678 1527 ntBASIC29.37■■■□□ 2.29
CFTRP13569 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC29.37■■■□□ 2.29
CFTRP13569 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CFTRP13569 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC29.37■■■□□ 2.29
CFTRP13569 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
CFTRP13569 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
CFTRP13569 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC29.36■■■□□ 2.29
CFTRP13569 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC29.36■■■□□ 2.29
CFTRP13569 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC29.36■■■□□ 2.29
CFTRP13569 AC073389.1-201ENST00000595595 795 ntBASIC29.36■■■□□ 2.29
CFTRP13569 AC004233.3-201ENST00000607794 1269 ntBASIC29.36■■■□□ 2.29
CFTRP13569 AC008738.7-201ENST00000609744 511 ntBASIC29.36■■■□□ 2.29
CFTRP13569 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
CFTRP13569 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
CFTRP13569 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CFTRP13569 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
CFTRP13569 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC29.35■■■□□ 2.29
CFTRP13569 STK4-201ENST00000372801 2038 ntTSL 2 BASIC29.35■■■□□ 2.29
CFTRP13569 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC29.35■■■□□ 2.29
CFTRP13569 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CFTRP13569 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CFTRP13569 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC29.35■■■□□ 2.29
CFTRP13569 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CFTRP13569 FLJ13224-201ENST00000313737 1514 ntBASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms