Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17■□□□□ 0.31
PCNAP12004 CHCHD2P8-201ENST00000429873 447 ntBASIC17■□□□□ 0.31
PCNAP12004 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
PCNAP12004 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17■□□□□ 0.31
PCNAP12004 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17■□□□□ 0.31
PCNAP12004 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17■□□□□ 0.31
PCNAP12004 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17■□□□□ 0.31
PCNAP12004 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17■□□□□ 0.31
PCNAP12004 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17■□□□□ 0.31
PCNAP12004 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17■□□□□ 0.31
PCNAP12004 DBP-204ENST00000599385 709 ntTSL 3 BASIC17■□□□□ 0.31
PCNAP12004 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17■□□□□ 0.31
PCNAP12004 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCNAP12004 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17■□□□□ 0.31
PCNAP12004 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17■□□□□ 0.31
PCNAP12004 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17■□□□□ 0.31
PCNAP12004 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCNAP12004 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17■□□□□ 0.31
PCNAP12004 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17■□□□□ 0.31
PCNAP12004 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCNAP12004 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 AC010460.3-201ENST00000511359 1579 ntBASIC16.99■□□□□ 0.31
PCNAP12004 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCNAP12004 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCNAP12004 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCNAP12004 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCNAP12004 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 AC096633.1-201ENST00000422446 749 ntBASIC16.99■□□□□ 0.31
PCNAP12004 KRT18P35-201ENST00000510488 1269 ntBASIC16.99■□□□□ 0.31
PCNAP12004 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.99■□□□□ 0.31
PCNAP12004 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.99■□□□□ 0.31
PCNAP12004 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.99■□□□□ 0.31
PCNAP12004 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 AC116407.4-201ENST00000623319 1061 ntBASIC16.99■□□□□ 0.31
PCNAP12004 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCNAP12004 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.99■□□□□ 0.31
PCNAP12004 AC016734.2-201ENST00000624325 1377 ntBASIC16.99■□□□□ 0.31
PCNAP12004 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.99■□□□□ 0.31
PCNAP12004 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
PCNAP12004 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCNAP12004 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 KRT18P1-202ENST00000452408 1331 ntBASIC16.98■□□□□ 0.31
PCNAP12004 AL138688.1-201ENST00000624851 1594 ntBASIC16.98■□□□□ 0.31
PCNAP12004 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.98■□□□□ 0.31
PCNAP12004 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 ARMC10P1-201ENST00000313754 855 ntBASIC16.98■□□□□ 0.31
PCNAP12004 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCNAP12004 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.98■□□□□ 0.31
PCNAP12004 VENTXP7-201ENST00000475503 772 ntBASIC16.98■□□□□ 0.31
PCNAP12004 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.98■□□□□ 0.31
PCNAP12004 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.98■□□□□ 0.31
PCNAP12004 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms