Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE3O75131 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE3O75131 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CPNE3O75131 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE3O75131 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CPNE3O75131 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE3O75131 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE3O75131 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE3O75131 BX005266.1-201ENST00000473402 457 ntBASIC16.74■□□□□ 0.27
CPNE3O75131 AC092910.1-201ENST00000482027 1129 ntBASIC16.74■□□□□ 0.27
CPNE3O75131 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE3O75131 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 AC073592.4-201ENST00000623827 446 ntBASIC16.74■□□□□ 0.27
CPNE3O75131 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE3O75131 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE3O75131 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
CPNE3O75131 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE3O75131 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE3O75131 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.73■□□□□ 0.27
CPNE3O75131 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE3O75131 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE3O75131 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CPNE3O75131 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE3O75131 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CPNE3O75131 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 SIGLEC16-201ENST00000599858 1437 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE3O75131 SPDYE21P-201ENST00000413323 827 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 AC098831.1-202ENST00000438821 336 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE3O75131 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE3O75131 IGHV3-22-201ENST00000520721 359 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.72■□□□□ 0.27
CPNE3O75131 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CPNE3O75131 AC105339.3-201ENST00000560043 636 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 GPALPP1-207ENST00000611650 899 ntBASIC16.72■□□□□ 0.27
CPNE3O75131 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
CPNE3O75131 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
CPNE3O75131 AC073592.5-201ENST00000624854 528 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms