Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 ABCD1P5-201ENST00000445663 754 ntBASIC16.74■□□□□ 0.27
PRAMEF4O60810 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 AP001269.4-201ENST00000609611 512 ntBASIC16.74■□□□□ 0.27
PRAMEF4O60810 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.74■□□□□ 0.27
PRAMEF4O60810 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF4O60810 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AC132008.2-207ENST00000454517 770 ntBASIC16.73■□□□□ 0.27
PRAMEF4O60810 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AL591684.3-201ENST00000605187 298 ntBASIC16.73■□□□□ 0.27
PRAMEF4O60810 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AL732292.2-201ENST00000609649 430 ntBASIC16.73■□□□□ 0.27
PRAMEF4O60810 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF4O60810 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PRAMEF4O60810 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 AC004817.3-201ENST00000602957 2129 ntBASIC16.72■□□□□ 0.27
PRAMEF4O60810 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 SPDYE21P-201ENST00000413323 827 ntBASIC16.72■□□□□ 0.27
PRAMEF4O60810 NUS1P1-201ENST00000446295 882 ntBASIC16.72■□□□□ 0.27
PRAMEF4O60810 KRT16P4-201ENST00000453883 522 ntBASIC16.72■□□□□ 0.27
PRAMEF4O60810 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF4O60810 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRAMEF4O60810 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF4O60810 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF4O60810 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms