Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC007064.4-201ENST00000637740 555 ntBASIC20.87■□□□□ 0.93
SEMA3EO15041 LETM1P2-201ENST00000597330 2178 ntBASIC20.87■□□□□ 0.93
SEMA3EO15041 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3EO15041 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SEMA3EO15041 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SEMA3EO15041 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
SEMA3EO15041 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SEMA3EO15041 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SEMA3EO15041 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.86■□□□□ 0.93
SEMA3EO15041 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.86■□□□□ 0.93
SEMA3EO15041 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.86■□□□□ 0.93
SEMA3EO15041 KRT19P2-202ENST00000557173 1012 ntBASIC20.86■□□□□ 0.93
SEMA3EO15041 AC005829.1-201ENST00000570002 483 ntBASIC20.86■□□□□ 0.93
SEMA3EO15041 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
SEMA3EO15041 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SEMA3EO15041 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA3EO15041 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA3EO15041 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA3EO15041 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 AC129492.6-201ENST00000611383 1305 ntBASIC20.85■□□□□ 0.93
SEMA3EO15041 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SEMA3EO15041 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.85■□□□□ 0.93
SEMA3EO15041 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SEMA3EO15041 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
SEMA3EO15041 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SEMA3EO15041 MKNK2P1-201ENST00000437526 628 ntBASIC20.85■□□□□ 0.93
SEMA3EO15041 AC004967.1-201ENST00000453589 447 ntBASIC20.85■□□□□ 0.93
SEMA3EO15041 SLC25A6P2-201ENST00000497974 877 ntBASIC20.85■□□□□ 0.93
SEMA3EO15041 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.85■□□□□ 0.93
SEMA3EO15041 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.85■□□□□ 0.93
SEMA3EO15041 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 AC023141.13-201ENST00000604991 943 ntBASIC20.85■□□□□ 0.93
SEMA3EO15041 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SEMA3EO15041 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA3EO15041 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA3EO15041 BCAR1-209ENST00000546196 1340 ntBASIC20.84■□□□□ 0.93
SEMA3EO15041 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA3EO15041 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA3EO15041 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.84■□□□□ 0.93
SEMA3EO15041 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA3EO15041 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.84■□□□□ 0.93
SEMA3EO15041 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
SEMA3EO15041 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.84■□□□□ 0.93
SEMA3EO15041 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA3EO15041 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA3EO15041 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA3EO15041 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA3EO15041 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA3EO15041 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.84■□□□□ 0.93
SEMA3EO15041 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SEMA3EO15041 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA3EO15041 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.83■□□□□ 0.93
SEMA3EO15041 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.83■□□□□ 0.93
SEMA3EO15041 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA3EO15041 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA3EO15041 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA3EO15041 NOC2LP2-201ENST00000407594 1944 ntBASIC20.83■□□□□ 0.93
SEMA3EO15041 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.83■□□□□ 0.93
SEMA3EO15041 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.83■□□□□ 0.93
SEMA3EO15041 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.83■□□□□ 0.93
SEMA3EO15041 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.83■□□□□ 0.93
SEMA3EO15041 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.83■□□□□ 0.93
SEMA3EO15041 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA3EO15041 AC079781.4-201ENST00000641908 219 ntBASIC20.83■□□□□ 0.93
SEMA3EO15041 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA3EO15041 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA3EO15041 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEMA3EO15041 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEMA3EO15041 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SEMA3EO15041 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.83■□□□□ 0.92
SEMA3EO15041 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEMA3EO15041 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SEMA3EO15041 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEMA3EO15041 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEMA3EO15041 AC025580.3-201ENST00000617932 1424 ntBASIC20.82■□□□□ 0.92
SEMA3EO15041 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEMA3EO15041 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SEMA3EO15041 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEMA3EO15041 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SEMA3EO15041 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms