Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 AL035456.1-201ENST00000456064 1369 ntBASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 ZNF890P-202ENST00000530367 1156 ntBASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL25A1Q9BXS0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AC098850.1-201ENST00000419919 790 ntBASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AC109635.5-201ENST00000533593 962 ntBASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 ACTG1P17-201ENST00000558391 1119 ntBASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 HLA-C-210ENST00000640219 976 ntBASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL25A1Q9BXS0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 KRT18P34-201ENST00000488218 1270 ntBASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AC233724.13-201ENST00000598383 410 ntBASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AL033527.5-201ENST00000641382 801 ntBASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL25A1Q9BXS0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 MIR33B-201ENST00000385104 96 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 ACTG1P4-201ENST00000425123 1122 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 MTND6P24-201ENST00000440466 518 ntBASIC17.39■□□□□ 0.37
COL25A1Q9BXS0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms