Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 AC006116.8-202ENST00000587620 1550 ntBASIC18.8■□□□□ 0.6
HERC6Q8IVU3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HERC6Q8IVU3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AC092919.2-201ENST00000623631 1645 ntBASIC18.79■□□□□ 0.6
HERC6Q8IVU3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AC015911.4-201ENST00000588022 1070 ntBASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AL390955.2-201ENST00000603032 514 ntBASIC18.79■□□□□ 0.6
HERC6Q8IVU3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AJ011932.1-201ENST00000621707 465 ntBASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERC6Q8IVU3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AC112191.1-201ENST00000523689 701 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 Z92544.3-201ENST00000624747 417 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AF228730.6-201ENST00000641497 218 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AC084121.3-201ENST00000641716 218 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AC105233.6-201ENST00000642093 218 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 AC073592.3-201ENST00000625118 1834 ntBASIC18.78■□□□□ 0.6
HERC6Q8IVU3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERC6Q8IVU3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 PMS2P4-201ENST00000412466 1052 ntBASIC18.77■□□□□ 0.6
HERC6Q8IVU3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 ADH5P3-201ENST00000433842 1137 ntBASIC18.77■□□□□ 0.6
HERC6Q8IVU3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 FAM185BP-201ENST00000443595 716 ntBASIC18.77■□□□□ 0.6
HERC6Q8IVU3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HERC6Q8IVU3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms