Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC027307.2-201ENST00000591252 911 ntBASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SNAPC4Q5SXM2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 HNRNPA3P5-201ENST00000455201 833 ntBASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 API5-211ENST00000534695 560 ntTSL 5 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC28.12■■■□□ 2.09
SNAPC4Q5SXM2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 ACA64.2-201ENST00000459014 129 ntBASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 WASH4P-201ENST00000564273 1246 ntBASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 HNRNPRP1-201ENST00000453465 1695 ntBASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SNAPC4Q5SXM2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 AC138969.3-201ENST00000546612 1459 ntBASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 AC138932.2-201ENST00000548268 1459 ntBASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 AC126755.4-201ENST00000549796 1459 ntBASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 AC008738.7-201ENST00000609744 511 ntBASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SNAPC4Q5SXM2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 RPS2P32-201ENST00000439199 892 ntBASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC28.09■■■□□ 2.09
SNAPC4Q5SXM2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 AC017083.2-201ENST00000608069 979 ntBASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 AC142381.1-201ENST00000426099 345 ntBASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SNAPC4Q5SXM2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.08
SNAPC4Q5SXM2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC28.07■■■□□ 2.08
SNAPC4Q5SXM2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
SNAPC4Q5SXM2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC28.07■■■□□ 2.08
SNAPC4Q5SXM2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
SNAPC4Q5SXM2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms