Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.18■■□□□ 1.3
COL16A1Q07092 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.18■■□□□ 1.3
COL16A1Q07092 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
COL16A1Q07092 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC23.18■■□□□ 1.3
COL16A1Q07092 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC23.18■■□□□ 1.3
COL16A1Q07092 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.18■■□□□ 1.3
COL16A1Q07092 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
COL16A1Q07092 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC23.18■■□□□ 1.3
COL16A1Q07092 COX11-210ENST00000639671 696 ntBASIC23.18■■□□□ 1.3
COL16A1Q07092 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 STX3-203ENST00000529177 1571 ntTSL 2 BASIC23.18■■□□□ 1.3
COL16A1Q07092 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL16A1Q07092 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
COL16A1Q07092 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
COL16A1Q07092 AC016027.1-202ENST00000607927 1699 ntBASIC23.17■■□□□ 1.3
COL16A1Q07092 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
COL16A1Q07092 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC23.17■■□□□ 1.3
COL16A1Q07092 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC23.17■■□□□ 1.3
COL16A1Q07092 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC23.17■■□□□ 1.3
COL16A1Q07092 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
COL16A1Q07092 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC23.17■■□□□ 1.3
COL16A1Q07092 HLA-DPB2-205ENST00000435074 1188 ntBASIC23.17■■□□□ 1.3
COL16A1Q07092 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL16A1Q07092 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC23.17■■□□□ 1.3
COL16A1Q07092 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC23.17■■□□□ 1.3
COL16A1Q07092 MIR6787-201ENST00000616675 61 ntBASIC23.17■■□□□ 1.3
COL16A1Q07092 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL16A1Q07092 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL16A1Q07092 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL16A1Q07092 AC012569.1-201ENST00000591191 1524 ntBASIC23.16■■□□□ 1.3
COL16A1Q07092 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC23.16■■□□□ 1.3
COL16A1Q07092 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL16A1Q07092 ANKRD19P-201ENST00000338192 862 ntBASIC23.16■■□□□ 1.3
COL16A1Q07092 AL080243.2-201ENST00000418783 582 ntBASIC23.16■■□□□ 1.3
COL16A1Q07092 PARP8-206ENST00000503665 572 ntTSL 4 BASIC23.16■■□□□ 1.3
COL16A1Q07092 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC23.16■■□□□ 1.3
COL16A1Q07092 ZNF890P-202ENST00000530367 1156 ntBASIC23.16■■□□□ 1.3
COL16A1Q07092 USB1-203ENST00000539737 1212 ntTSL 2 BASIC23.16■■□□□ 1.3
COL16A1Q07092 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC23.16■■□□□ 1.3
COL16A1Q07092 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.16■■□□□ 1.3
COL16A1Q07092 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL16A1Q07092 AC126763.1-201ENST00000552015 2118 ntBASIC23.16■■□□□ 1.3
COL16A1Q07092 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL16A1Q07092 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
COL16A1Q07092 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL16A1Q07092 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC23.15■■□□□ 1.3
COL16A1Q07092 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC23.15■■□□□ 1.3
COL16A1Q07092 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC23.15■■□□□ 1.3
COL16A1Q07092 ORC6-206ENST00000568364 888 ntTSL 5 BASIC23.15■■□□□ 1.3
COL16A1Q07092 MIR4538-201ENST00000581377 78 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC23.15■■□□□ 1.3
COL16A1Q07092 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.15■■□□□ 1.3
COL16A1Q07092 KRT8P44-201ENST00000441609 1350 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 FOXO1B-201ENST00000504678 1527 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC23.15■■□□□ 1.3
COL16A1Q07092 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL16A1Q07092 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
COL16A1Q07092 AP005482.1-201ENST00000563722 1273 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC23.15■■□□□ 1.3
COL16A1Q07092 CHCHD2P3-201ENST00000603038 451 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 AL109936.8-201ENST00000641772 604 ntBASIC23.15■■□□□ 1.3
COL16A1Q07092 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL16A1Q07092 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL16A1Q07092 AC046185.3-201ENST00000623228 1824 ntBASIC23.14■■□□□ 1.3
COL16A1Q07092 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL16A1Q07092 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL16A1Q07092 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL16A1Q07092 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
COL16A1Q07092 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL16A1Q07092 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL16A1Q07092 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC23.14■■□□□ 1.29
COL16A1Q07092 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL16A1Q07092 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL16A1Q07092 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC23.14■■□□□ 1.29
COL16A1Q07092 BANF1P1-201ENST00000553684 263 ntBASIC23.14■■□□□ 1.29
COL16A1Q07092 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL16A1Q07092 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms