Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC109462.3-201ENST00000573934 613 ntBASIC16.83■□□□□ 0.28
HMGCS1Q01581 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 AC005336.2-201ENST00000593183 939 ntBASIC16.83■□□□□ 0.28
HMGCS1Q01581 AC019129.2-201ENST00000609837 1235 ntBASIC16.83■□□□□ 0.28
HMGCS1Q01581 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS1Q01581 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMGCS1Q01581 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AL031133.1-201ENST00000406807 723 ntBASIC16.82■□□□□ 0.28
HMGCS1Q01581 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AC087388.1-201ENST00000571370 1112 ntBASIC16.82■□□□□ 0.28
HMGCS1Q01581 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.82■□□□□ 0.28
HMGCS1Q01581 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGCS1Q01581 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCS1Q01581 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 AC090616.6-201ENST00000582640 721 ntBASIC16.81■□□□□ 0.28
HMGCS1Q01581 AL353801.3-201ENST00000609898 542 ntBASIC16.81■□□□□ 0.28
HMGCS1Q01581 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 AC106886.4-201ENST00000623557 2502 ntBASIC16.81■□□□□ 0.28
HMGCS1Q01581 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCS1Q01581 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCS1Q01581 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 ARMC10P1-201ENST00000313754 855 ntBASIC16.8■□□□□ 0.28
HMGCS1Q01581 KRT8P26-201ENST00000534154 1276 ntBASIC16.8■□□□□ 0.28
HMGCS1Q01581 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCS1Q01581 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 AC011840.4-201ENST00000578471 627 ntBASIC16.8■□□□□ 0.28
HMGCS1Q01581 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HMGCS1Q01581 AL138831.2-201ENST00000606564 490 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms