Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXD11P31277 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HOXD11P31277 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXD11P31277 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXD11P31277 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXD11P31277 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 MIR662-201ENST00000384847 95 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD11P31277 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 MTCYBP39-201ENST00000437562 491 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 NPM1P23-201ENST00000440193 849 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD11P31277 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HOXD11P31277 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 Z85996.1-201ENST00000494644 937 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
HOXD11P31277 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 HDAC2-AS2-211ENST00000520034 790 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD11P31277 OR9G3P-201ENST00000525553 918 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 AC002347.1-201ENST00000569543 541 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXD11P31277 MTATP6P3-201ENST00000581686 676 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 AC090616.6-201ENST00000582640 721 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 MTDHP5-201ENST00000598980 586 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 AP003973.1-201ENST00000604639 691 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 AC108125.1-201ENST00000622310 543 ntBASIC18.82■□□□□ 0.6
HOXD11P31277 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXD11P31277 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXD11P31277 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXD11P31277 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD11P31277 ZNF506-202ENST00000450683 1385 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
HOXD11P31277 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD11P31277 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 AC074138.1-201ENST00000611182 1303 ntBASIC18.81■□□□□ 0.6
HOXD11P31277 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXD11P31277 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 ABRACL-201ENST00000367660 845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXD11P31277 AMZ2P2-201ENST00000406819 1057 ntBASIC18.81■□□□□ 0.6
HOXD11P31277 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 AC092447.2-201ENST00000435487 669 ntBASIC18.81■□□□□ 0.6
HOXD11P31277 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXD11P31277 NDUFA12P1-201ENST00000455914 406 ntBASIC18.81■□□□□ 0.6
HOXD11P31277 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD11P31277 AC093755.1-201ENST00000512950 1023 ntBASIC18.81■□□□□ 0.6
HOXD11P31277 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD11P31277 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXD11P31277 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXD11P31277 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXD11P31277 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXD11P31277 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD11P31277 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD11P31277 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXD11P31277 MS4A3-202ENST00000358152 1516 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXD11P31277 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD11P31277 AL021707.2-203ENST00000444381 1325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD11P31277 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD11P31277 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD11P31277 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXD11P31277 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXD11P31277 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms