Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC074051.2-201ENST00000565115 352 ntBASIC17.21■□□□□ 0.35
CAPN1P07384 AP005901.3-202ENST00000581653 237 ntBASIC17.21■□□□□ 0.35
CAPN1P07384 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPN1P07384 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.21■□□□□ 0.35
CAPN1P07384 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPN1P07384 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CAPN1P07384 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.21■□□□□ 0.35
CAPN1P07384 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CAPN1P07384 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.21■□□□□ 0.35
CAPN1P07384 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.21■□□□□ 0.34
CAPN1P07384 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CAPN1P07384 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CAPN1P07384 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CAPN1P07384 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 AC004870.1-201ENST00000315132 882 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CAPN1P07384 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.2■□□□□ 0.34
CAPN1P07384 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.2■□□□□ 0.34
CAPN1P07384 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.2■□□□□ 0.34
CAPN1P07384 AC091607.1-201ENST00000490318 1060 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 KRT18P31-201ENST00000506277 1292 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 AC112698.1-201ENST00000510299 916 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.2■□□□□ 0.34
CAPN1P07384 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.2■□□□□ 0.34
CAPN1P07384 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
CAPN1P07384 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 AP001094.4-201ENST00000579008 2176 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CAPN1P07384 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 PCDHA12-202ENST00000613593 2588 ntBASIC17.2■□□□□ 0.34
CAPN1P07384 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CAPN1P07384 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.2■□□□□ 0.34
CAPN1P07384 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CAPN1P07384 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CAPN1P07384 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
CAPN1P07384 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.19■□□□□ 0.34
CAPN1P07384 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.19■□□□□ 0.34
CAPN1P07384 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.19■□□□□ 0.34
CAPN1P07384 FDX1P1-201ENST00000449115 551 ntBASIC17.19■□□□□ 0.34
CAPN1P07384 KRT17P6-201ENST00000453795 1220 ntBASIC17.19■□□□□ 0.34
CAPN1P07384 EMBP1-201ENST00000458200 901 ntBASIC17.19■□□□□ 0.34
CAPN1P07384 AC091304.2-201ENST00000564639 760 ntBASIC17.19■□□□□ 0.34
CAPN1P07384 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.19■□□□□ 0.34
CAPN1P07384 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CAPN1P07384 AL121772.3-201ENST00000610840 674 ntBASIC17.19■□□□□ 0.34
CAPN1P07384 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CAPN1P07384 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CAPN1P07384 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CAPN1P07384 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CAPN1P07384 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CAPN1P07384 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CAPN1P07384 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.19■□□□□ 0.34
CAPN1P07384 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 CROCCP1-201ENST00000426910 5675 ntBASIC17.18■□□□□ 0.34
CAPN1P07384 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.18■□□□□ 0.34
CAPN1P07384 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CAPN1P07384 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.18■□□□□ 0.34
CAPN1P07384 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms