Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.93■■□□□ 1.42
MSH5O43196 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.93■■□□□ 1.42
MSH5O43196 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.93■■□□□ 1.42
MSH5O43196 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 AC095050.2-201ENST00000510748 1458 ntBASIC23.93■■□□□ 1.42
MSH5O43196 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
MSH5O43196 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
MSH5O43196 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
MSH5O43196 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
MSH5O43196 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
MSH5O43196 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
MSH5O43196 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC23.92■■□□□ 1.42
MSH5O43196 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 NUS1P2-201ENST00000417358 873 ntBASIC23.92■■□□□ 1.42
MSH5O43196 MTND2P18-201ENST00000419962 1030 ntBASIC23.92■■□□□ 1.42
MSH5O43196 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC23.92■■□□□ 1.42
MSH5O43196 AF238378.1-201ENST00000526806 358 ntBASIC23.92■■□□□ 1.42
MSH5O43196 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
MSH5O43196 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 Z98044.1-201ENST00000632503 1764 ntBASIC23.92■■□□□ 1.42
MSH5O43196 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.92■■□□□ 1.42
MSH5O43196 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.92■■□□□ 1.42
MSH5O43196 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
MSH5O43196 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.91■■□□□ 1.42
MSH5O43196 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 AC106785.2-201ENST00000564385 1319 ntBASIC23.91■■□□□ 1.42
MSH5O43196 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.91■■□□□ 1.42
MSH5O43196 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
MSH5O43196 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.91■■□□□ 1.42
MSH5O43196 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.91■■□□□ 1.42
MSH5O43196 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.91■■□□□ 1.42
MSH5O43196 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.91■■□□□ 1.42
MSH5O43196 AL096803.3-201ENST00000609032 532 ntBASIC23.91■■□□□ 1.42
MSH5O43196 AC098679.4-201ENST00000624241 654 ntBASIC23.91■■□□□ 1.42
MSH5O43196 CICP6-201ENST00000457191 2729 ntBASIC23.91■■□□□ 1.42
MSH5O43196 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
MSH5O43196 AC135776.1-201ENST00000319817 2481 ntBASIC23.91■■□□□ 1.42
MSH5O43196 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
MSH5O43196 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
MSH5O43196 ARL9-201ENST00000360096 1392 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
MSH5O43196 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
MSH5O43196 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
MSH5O43196 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC23.9■■□□□ 1.42
MSH5O43196 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
MSH5O43196 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
MSH5O43196 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 AC090568.2-206ENST00000521936 1469 ntTSL 3 BASIC23.9■■□□□ 1.42
MSH5O43196 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC23.9■■□□□ 1.42
MSH5O43196 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC23.9■■□□□ 1.42
MSH5O43196 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.9■■□□□ 1.42
MSH5O43196 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC23.9■■□□□ 1.42
MSH5O43196 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
MSH5O43196 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC23.9■■□□□ 1.42
MSH5O43196 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.9■■□□□ 1.42
MSH5O43196 AL731537.2-201ENST00000561565 951 ntBASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms