Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC079776.2-201ENST00000641154 1609 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXN1O15353 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.79■□□□□ 0.92
FOXN1O15353 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 AC055876.3-201ENST00000431496 288 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.79■□□□□ 0.92
FOXN1O15353 MTCL1P1-201ENST00000446207 792 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 AC113404.2-201ENST00000507884 177 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.79■□□□□ 0.92
FOXN1O15353 KRT18P41-201ENST00000518924 1277 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 AC138649.4-201ENST00000612222 287 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 AC092902.6-201ENST00000641783 218 ntBASIC20.79■□□□□ 0.92
FOXN1O15353 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
FOXN1O15353 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXN1O15353 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXN1O15353 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
FOXN1O15353 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FOXN1O15353 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.78■□□□□ 0.92
FOXN1O15353 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXN1O15353 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXN1O15353 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXN1O15353 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXN1O15353 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
FOXN1O15353 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
FOXN1O15353 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXN1O15353 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXN1O15353 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXN1O15353 AC008764.6-201ENST00000595909 2069 ntBASIC20.77■□□□□ 0.92
FOXN1O15353 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXN1O15353 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.77■□□□□ 0.92
FOXN1O15353 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.77■□□□□ 0.92
FOXN1O15353 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXN1O15353 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXN1O15353 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXN1O15353 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXN1O15353 ARSEP1-201ENST00000420443 635 ntBASIC20.77■□□□□ 0.92
FOXN1O15353 FAM207CP-201ENST00000443486 507 ntBASIC20.77■□□□□ 0.92
FOXN1O15353 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXN1O15353 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
FOXN1O15353 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.77■□□□□ 0.92
FOXN1O15353 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXN1O15353 AC091812.2-201ENST00000619081 385 ntBASIC20.77■□□□□ 0.92
FOXN1O15353 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
FOXN1O15353 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXN1O15353 KRT8P50-201ENST00000562022 1438 ntBASIC20.77■□□□□ 0.91
FOXN1O15353 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
FOXN1O15353 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
FOXN1O15353 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
FOXN1O15353 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
FOXN1O15353 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.76■□□□□ 0.91
FOXN1O15353 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN1O15353 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXN1O15353 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXN1O15353 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXN1O15353 IGLL3P-201ENST00000412472 434 ntBASIC20.76■□□□□ 0.91
FOXN1O15353 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.76■□□□□ 0.91
FOXN1O15353 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FOXN1O15353 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.76■□□□□ 0.91
FOXN1O15353 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms