Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 AC006970.2-201ENST00000450065 779 ntBASIC12.31□□□□□ -0.44
LINC01546A6NGU7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 AC133041.1-202ENST00000642053 222 ntBASIC12.31□□□□□ -0.44
LINC01546A6NGU7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 AL603832.2-201ENST00000566195 2125 ntBASIC12.3□□□□□ -0.44
LINC01546A6NGU7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.3□□□□□ -0.44
LINC01546A6NGU7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01546A6NGU7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 FRMD8P1-201ENST00000440433 1524 ntBASIC12.29□□□□□ -0.44
LINC01546A6NGU7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms