Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB2Q9Y5E7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 HTR7P1-202ENST00000624664 4411 ntBASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 AC003669.1-201ENST00000334569 611 ntBASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 AL589182.2-201ENST00000619332 1049 ntBASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 AC138932.1-201ENST00000534164 6830 ntBASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB2Q9Y5E7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 AC073621.1-201ENST00000392730 636 ntBASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 AC140113.2-201ENST00000604370 208 ntBASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 MIR1199-201ENST00000621445 119 ntBASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB2Q9Y5E7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHB2Q9Y5E7 KRT18P13-201ENST00000400056 1290 ntBASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 MED15P5-201ENST00000423150 992 ntBASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 FAM197Y3-203ENST00000618346 717 ntBASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB2Q9Y5E7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHB2Q9Y5E7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms