Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C11orf49Q9H6J7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 AFG3L1P-217ENST00000557444 2447 ntBASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 U91328.1-201ENST00000437528 223 ntBASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C11orf49Q9H6J7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 HMGA1P7-201ENST00000406908 502 ntBASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AC027369.6-201ENST00000525520 931 ntBASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AL009183.1-201ENST00000603760 355 ntBASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AL135999.2-201ENST00000622438 1686 ntBASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 AL096828.2-201ENST00000567259 1965 ntBASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C11orf49Q9H6J7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 MIR4453-201ENST00000584019 89 ntBASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AL590560.3-201ENST00000623350 461 ntBASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AC073592.8-201ENST00000624126 511 ntBASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AC100757.3-201ENST00000622361 1406 ntBASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 AC093677.2-201ENST00000600169 1863 ntBASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
C11orf49Q9H6J7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms