Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USB1Q9BQ65 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
USB1Q9BQ65 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
USB1Q9BQ65 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 AC091607.1-201ENST00000490318 1060 ntBASIC15.64■□□□□ 0.09
USB1Q9BQ65 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 MIR3908-201ENST00000579798 126 ntBASIC15.64■□□□□ 0.09
USB1Q9BQ65 AC005336.2-201ENST00000593183 939 ntBASIC15.64■□□□□ 0.09
USB1Q9BQ65 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 AL121894.2-201ENST00000602977 491 ntBASIC15.64■□□□□ 0.09
USB1Q9BQ65 OR13I1P-201ENST00000609811 1264 ntBASIC15.64■□□□□ 0.09
USB1Q9BQ65 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 AC116407.2-201ENST00000613639 860 ntBASIC15.64■□□□□ 0.09
USB1Q9BQ65 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
USB1Q9BQ65 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USB1Q9BQ65 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 FAM220CP-201ENST00000395253 831 ntBASIC15.63■□□□□ 0.09
USB1Q9BQ65 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 AC096633.1-201ENST00000422446 749 ntBASIC15.63■□□□□ 0.09
USB1Q9BQ65 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 EMBP1-201ENST00000458200 901 ntBASIC15.63■□□□□ 0.09
USB1Q9BQ65 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 AC126763.1-201ENST00000552015 2118 ntBASIC15.63■□□□□ 0.09
USB1Q9BQ65 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.63■□□□□ 0.09
USB1Q9BQ65 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
USB1Q9BQ65 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms