Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RNF2Q99496 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF2Q99496 KRT18P57-201ENST00000443599 1254 ntBASIC13.96□□□□□ -0.17
RNF2Q99496 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RNF2Q99496 SEC1P-202ENST00000473944 940 ntBASIC13.96□□□□□ -0.17
RNF2Q99496 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF2Q99496 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.96□□□□□ -0.17
RNF2Q99496 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.96□□□□□ -0.17
RNF2Q99496 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF2Q99496 AC140113.3-201ENST00000605663 199 ntBASIC13.96□□□□□ -0.17
RNF2Q99496 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF2Q99496 AC010240.3-201ENST00000607688 395 ntBASIC13.96□□□□□ -0.17
RNF2Q99496 AL023973.1-201ENST00000624619 620 ntBASIC13.96□□□□□ -0.17
RNF2Q99496 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF2Q99496 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF2Q99496 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
RNF2Q99496 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF2Q99496 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF2Q99496 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.96□□□□□ -0.17
RNF2Q99496 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF2Q99496 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.96□□□□□ -0.18
RNF2Q99496 C8orf49-201ENST00000525043 1968 ntBASIC13.96□□□□□ -0.18
RNF2Q99496 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RNF2Q99496 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RNF2Q99496 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF2Q99496 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.95□□□□□ -0.18
RNF2Q99496 COX11P1-201ENST00000489116 835 ntBASIC13.95□□□□□ -0.18
RNF2Q99496 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.95□□□□□ -0.18
RNF2Q99496 AC092865.7-201ENST00000641832 219 ntBASIC13.95□□□□□ -0.18
RNF2Q99496 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RNF2Q99496 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
RNF2Q99496 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RNF2Q99496 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RNF2Q99496 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.95□□□□□ -0.18
RNF2Q99496 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF2Q99496 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF2Q99496 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF2Q99496 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.94□□□□□ -0.18
RNF2Q99496 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.94□□□□□ -0.18
RNF2Q99496 BX664615.1-201ENST00000443558 458 ntBASIC13.94□□□□□ -0.18
RNF2Q99496 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.94□□□□□ -0.18
RNF2Q99496 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 GCSHP2-201ENST00000560971 527 ntBASIC13.94□□□□□ -0.18
RNF2Q99496 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RNF2Q99496 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RNF2Q99496 AC073508.3-201ENST00000619697 1419 ntBASIC13.94□□□□□ -0.18
RNF2Q99496 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.94□□□□□ -0.18
RNF2Q99496 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RNF2Q99496 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms