Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC124947.2-201ENST00000547118 1133 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 AC005332.3-201ENST00000589904 676 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.5■□□□□ 0.55
CALR3Q96L12 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 AL390719.2-201ENST00000606993 987 ntBASIC18.5■□□□□ 0.55
CALR3Q96L12 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CALR3Q96L12 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CALR3Q96L12 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
CALR3Q96L12 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CALR3Q96L12 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.49■□□□□ 0.55
CALR3Q96L12 AC060834.1-201ENST00000443027 2032 ntBASIC18.49■□□□□ 0.55
CALR3Q96L12 AC105020.1-201ENST00000435356 2205 ntBASIC18.49■□□□□ 0.55
CALR3Q96L12 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CALR3Q96L12 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.49■□□□□ 0.55
CALR3Q96L12 AL137013.1-201ENST00000432946 1228 ntBASIC18.49■□□□□ 0.55
CALR3Q96L12 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 AC122714.2-201ENST00000502787 707 ntBASIC18.49■□□□□ 0.55
CALR3Q96L12 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.49■□□□□ 0.55
CALR3Q96L12 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.49■□□□□ 0.55
CALR3Q96L12 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.49■□□□□ 0.55
CALR3Q96L12 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.49■□□□□ 0.55
CALR3Q96L12 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CALR3Q96L12 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.49■□□□□ 0.55
CALR3Q96L12 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CALR3Q96L12 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CALR3Q96L12 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.48■□□□□ 0.55
CALR3Q96L12 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.48■□□□□ 0.55
CALR3Q96L12 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CALR3Q96L12 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CALR3Q96L12 AL596275.1-201ENST00000423464 877 ntBASIC18.48■□□□□ 0.55
CALR3Q96L12 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 AC092597.1-201ENST00000487352 616 ntBASIC18.48■□□□□ 0.55
CALR3Q96L12 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CALR3Q96L12 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.48■□□□□ 0.55
CALR3Q96L12 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.48■□□□□ 0.55
CALR3Q96L12 AC005363.2-201ENST00000618631 242 ntBASIC18.48■□□□□ 0.55
CALR3Q96L12 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CALR3Q96L12 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CALR3Q96L12 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 PKD1P1-201ENST00000458669 6805 ntBASIC18.48■□□□□ 0.55
CALR3Q96L12 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.48■□□□□ 0.55
CALR3Q96L12 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CALR3Q96L12 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CALR3Q96L12 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.47■□□□□ 0.55
CALR3Q96L12 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.47■□□□□ 0.55
CALR3Q96L12 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 AC103564.2-201ENST00000432853 1299 ntBASIC18.47■□□□□ 0.55
CALR3Q96L12 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 AL359075.1-203ENST00000462729 1002 ntBASIC18.47■□□□□ 0.55
CALR3Q96L12 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.47■□□□□ 0.55
CALR3Q96L12 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.47■□□□□ 0.55
CALR3Q96L12 AC139887.4-201ENST00000607877 719 ntBASIC18.47■□□□□ 0.55
CALR3Q96L12 AC097493.4-201ENST00000641197 219 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms