Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF31Q96EP0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF31Q96EP0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 KRT18P13-201ENST00000400056 1290 ntBASIC16.86■□□□□ 0.29
RNF31Q96EP0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.86■□□□□ 0.29
RNF31Q96EP0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 AC007967.2-201ENST00000432613 625 ntBASIC16.86■□□□□ 0.29
RNF31Q96EP0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.86■□□□□ 0.29
RNF31Q96EP0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF31Q96EP0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RNF31Q96EP0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 KRT18P58-201ENST00000527480 1120 ntBASIC16.85■□□□□ 0.29
RNF31Q96EP0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.85■□□□□ 0.29
RNF31Q96EP0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 AC139530.3-201ENST00000620344 690 ntBASIC16.85■□□□□ 0.29
RNF31Q96EP0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF31Q96EP0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF31Q96EP0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.84■□□□□ 0.29
RNF31Q96EP0 AC073592.3-201ENST00000625118 1834 ntBASIC16.84■□□□□ 0.29
RNF31Q96EP0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms