Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 AC138761.1-201ENST00000584393 385 ntBASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 AC009093.7-201ENST00000623853 1223 ntBASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 MIR4745-201ENST00000577608 62 ntBASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 AC135050.7-201ENST00000624508 2218 ntBASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 AC135776.1-201ENST00000319817 2481 ntBASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CARMIL3Q8ND23 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 FAM86GP-201ENST00000448322 971 ntBASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 BICD1-207ENST00000551848 1962 ntBASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CARMIL3Q8ND23 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CARMIL3Q8ND23 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
CARMIL3Q8ND23 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CARMIL3Q8ND23 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms