Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
NUBP1P53384 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.35■□□□□ 0.37
NUBP1P53384 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.34■□□□□ 0.37
NUBP1P53384 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.34■□□□□ 0.37
NUBP1P53384 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NUBP1P53384 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 MRPS18AP1-201ENST00000414458 589 ntBASIC17.34■□□□□ 0.37
NUBP1P53384 SLC25A6P5-201ENST00000435663 894 ntBASIC17.34■□□□□ 0.37
NUBP1P53384 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.34■□□□□ 0.37
NUBP1P53384 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.34■□□□□ 0.37
NUBP1P53384 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.34■□□□□ 0.37
NUBP1P53384 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
NUBP1P53384 AC068987.2-201ENST00000565518 896 ntBASIC17.34■□□□□ 0.37
NUBP1P53384 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.34■□□□□ 0.37
NUBP1P53384 AC106886.1-201ENST00000568660 600 ntBASIC17.34■□□□□ 0.37
NUBP1P53384 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.34■□□□□ 0.37
NUBP1P53384 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.34■□□□□ 0.37
NUBP1P53384 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.34■□□□□ 0.37
NUBP1P53384 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 AL162274.1-201ENST00000617191 1098 ntBASIC17.34■□□□□ 0.37
NUBP1P53384 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUBP1P53384 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC17.34■□□□□ 0.37
NUBP1P53384 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NUBP1P53384 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NUBP1P53384 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.33■□□□□ 0.37
NUBP1P53384 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
NUBP1P53384 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUBP1P53384 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NUBP1P53384 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.33■□□□□ 0.37
NUBP1P53384 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NUBP1P53384 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 SPTLC1P1-201ENST00000447199 261 ntBASIC17.33■□□□□ 0.36
NUBP1P53384 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.33■□□□□ 0.36
NUBP1P53384 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.33■□□□□ 0.36
NUBP1P53384 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
NUBP1P53384 AC023968.2-201ENST00000560593 1049 ntBASIC17.33■□□□□ 0.36
NUBP1P53384 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC17.33■□□□□ 0.36
NUBP1P53384 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 AC016597.2-201ENST00000613256 341 ntBASIC17.33■□□□□ 0.36
NUBP1P53384 MIR6805-201ENST00000615055 62 ntBASIC17.33■□□□□ 0.36
NUBP1P53384 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NUBP1P53384 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NUBP1P53384 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.33■□□□□ 0.36
NUBP1P53384 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NUBP1P53384 GMCL1P1-201ENST00000463439 1581 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUBP1P53384 AL590787.1-201ENST00000568856 1315 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NUBP1P53384 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.32■□□□□ 0.36
NUBP1P53384 VN1R11P-201ENST00000407795 868 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 AC019070.1-201ENST00000415008 1024 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC17.32■□□□□ 0.36
NUBP1P53384 AL512637.1-201ENST00000439523 1231 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC17.32■□□□□ 0.36
NUBP1P53384 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.32■□□□□ 0.36
NUBP1P53384 AP003168.1-201ENST00000530091 307 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.32■□□□□ 0.36
NUBP1P53384 MIR6080-201ENST00000617359 66 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.32■□□□□ 0.36
NUBP1P53384 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.32■□□□□ 0.36
NUBP1P53384 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.32■□□□□ 0.36
NUBP1P53384 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.32■□□□□ 0.36
NUBP1P53384 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms