Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.12■□□□□ 0.65
CLTAP09496 AC073592.5-201ENST00000624854 528 ntBASIC19.12■□□□□ 0.65
CLTAP09496 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLTAP09496 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLTAP09496 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLTAP09496 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLTAP09496 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLTAP09496 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CLTAP09496 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLTAP09496 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLTAP09496 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.12■□□□□ 0.65
CLTAP09496 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.12■□□□□ 0.65
CLTAP09496 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLTAP09496 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.11■□□□□ 0.65
CLTAP09496 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 PRORSD1P-202ENST00000563365 2154 ntBASIC19.11■□□□□ 0.65
CLTAP09496 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.11■□□□□ 0.65
CLTAP09496 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.11■□□□□ 0.65
CLTAP09496 AC005104.2-201ENST00000427818 678 ntBASIC19.11■□□□□ 0.65
CLTAP09496 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 FDX1P1-201ENST00000449115 551 ntBASIC19.11■□□□□ 0.65
CLTAP09496 FAM197Y8-203ENST00000450145 560 ntBASIC19.11■□□□□ 0.65
CLTAP09496 AC009078.2-202ENST00000463353 338 ntBASIC19.11■□□□□ 0.65
CLTAP09496 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLTAP09496 IGHV3-52-201ENST00000519770 353 ntBASIC19.11■□□□□ 0.65
CLTAP09496 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CLTAP09496 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.11■□□□□ 0.65
CLTAP09496 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.11■□□□□ 0.65
CLTAP09496 AL139288.1-201ENST00000623748 933 ntBASIC19.11■□□□□ 0.65
CLTAP09496 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLTAP09496 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.11■□□□□ 0.65
CLTAP09496 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.11■□□□□ 0.65
CLTAP09496 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLTAP09496 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLTAP09496 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CLTAP09496 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.1■□□□□ 0.65
CLTAP09496 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 SART3-203ENST00000546611 1184 ntBASIC19.1■□□□□ 0.65
CLTAP09496 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.1■□□□□ 0.65
CLTAP09496 AC073592.4-201ENST00000623827 446 ntBASIC19.1■□□□□ 0.65
CLTAP09496 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLTAP09496 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CLTAP09496 AC079776.2-201ENST00000641154 1609 ntBASIC19.1■□□□□ 0.65
CLTAP09496 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLTAP09496 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLTAP09496 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.1■□□□□ 0.65
CLTAP09496 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.09■□□□□ 0.65
CLTAP09496 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.09■□□□□ 0.65
CLTAP09496 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLTAP09496 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.09■□□□□ 0.65
CLTAP09496 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms