Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDH17O14917 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.71■□□□□ 0.27
PCDH17O14917 FAM220CP-201ENST00000395253 831 ntBASIC16.71■□□□□ 0.27
PCDH17O14917 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 AC106795.1-205ENST00000512851 1056 ntBASIC16.71■□□□□ 0.27
PCDH17O14917 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCDH17O14917 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH17O14917 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDH17O14917 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PCDH17O14917 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
PCDH17O14917 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 AC132938.6-201ENST00000623828 1655 ntBASIC16.71■□□□□ 0.27
PCDH17O14917 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDH17O14917 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH17O14917 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH17O14917 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH17O14917 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH17O14917 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH17O14917 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH17O14917 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH17O14917 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 RCN1P2-201ENST00000398357 915 ntBASIC16.7■□□□□ 0.26
PCDH17O14917 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH17O14917 AC079781.3-201ENST00000449110 356 ntBASIC16.7■□□□□ 0.26
PCDH17O14917 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH17O14917 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH17O14917 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH17O14917 AC116407.2-201ENST00000613639 860 ntBASIC16.7■□□□□ 0.26
PCDH17O14917 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDH17O14917 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH17O14917 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH17O14917 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH17O14917 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH17O14917 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.69■□□□□ 0.26
PCDH17O14917 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCDH17O14917 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCDH17O14917 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCDH17O14917 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms