Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 RBM17P3-201ENST00000417687 1192 ntBASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 AF238378.1-201ENST00000526806 358 ntBASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 AC116407.2-201ENST00000613639 860 ntBASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
SH3KBP1Q96B97 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 AC106795.1-205ENST00000512851 1056 ntBASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 FZD10-202ENST00000539839 3282 ntBASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SH3KBP1Q96B97 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 FAM220CP-201ENST00000395253 831 ntBASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 AC009078.2-202ENST00000463353 338 ntBASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 AC008608.2-201ENST00000606089 416 ntBASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.34■□□□□ 0.37
SH3KBP1Q96B97 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 GNAS-203ENST00000306120 1878 ntBASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms