Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNKSR1Q969H4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 GK-202ENST00000378941 458 ntTSL 3 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 FAM207CP-201ENST00000443486 507 ntBASIC21.25■□□□□ 0.99
CNKSR1Q969H4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNKSR1Q969H4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 RBPMS2P1-201ENST00000437762 623 ntBASIC21.24■□□□□ 0.99
CNKSR1Q969H4 AC125807.1-201ENST00000483097 614 ntBASIC21.24■□□□□ 0.99
CNKSR1Q969H4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 AC140878.1-201ENST00000565277 250 ntBASIC21.24■□□□□ 0.99
CNKSR1Q969H4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNKSR1Q969H4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 AC046185.3-201ENST00000623228 1824 ntBASIC21.23■□□□□ 0.99
CNKSR1Q969H4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 UGT1A2P-201ENST00000454886 866 ntBASIC21.23■□□□□ 0.99
CNKSR1Q969H4 HLA-J-202ENST00000469281 1241 ntBASIC21.23■□□□□ 0.99
CNKSR1Q969H4 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 DUX4L17-201ENST00000557360 1267 ntBASIC21.23■□□□□ 0.99
CNKSR1Q969H4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNKSR1Q969H4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 GAPDHP21-201ENST00000450301 1010 ntBASIC21.22■□□□□ 0.99
CNKSR1Q969H4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 MIR4515-201ENST00000584082 81 ntBASIC21.22■□□□□ 0.99
CNKSR1Q969H4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 AL161645.1-201ENST00000622716 1255 ntBASIC21.22■□□□□ 0.99
CNKSR1Q969H4 AC008761.3-201ENST00000624803 892 ntBASIC21.22■□□□□ 0.99
CNKSR1Q969H4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNKSR1Q969H4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR1Q969H4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.21■□□□□ 0.99
CNKSR1Q969H4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNKSR1Q969H4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms