Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.31■□□□□ 0.36
HPS6Q86YV9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPS6Q86YV9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 NUS1P1-201ENST00000446295 882 ntBASIC17.3■□□□□ 0.36
HPS6Q86YV9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 KRT8P26-201ENST00000534154 1276 ntBASIC17.3■□□□□ 0.36
HPS6Q86YV9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 MIR3180-5-201ENST00000583743 153 ntBASIC17.3■□□□□ 0.36
HPS6Q86YV9 AC092119.3-201ENST00000612618 583 ntBASIC17.3■□□□□ 0.36
HPS6Q86YV9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.3■□□□□ 0.36
HPS6Q86YV9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPS6Q86YV9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 AC133963.1-201ENST00000504166 1679 ntBASIC17.29■□□□□ 0.36
HPS6Q86YV9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 AC105020.1-201ENST00000435356 2205 ntBASIC17.29■□□□□ 0.36
HPS6Q86YV9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 MIR564-202ENST00000385049 94 ntBASIC17.29■□□□□ 0.36
HPS6Q86YV9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.29■□□□□ 0.36
HPS6Q86YV9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HPS6Q86YV9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HPS6Q86YV9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
HPS6Q86YV9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.28■□□□□ 0.36
HPS6Q86YV9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 PCDHA14-201ENST00000506751 2298 ntBASIC17.28■□□□□ 0.36
HPS6Q86YV9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HPS6Q86YV9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms